Ding T. S., P. F. Lee and Y. S. Lin, 1997. Abundance and distribution of birds in four, high elevation plant communities in Yushan National Park, Taiwan. Acta Zoologica Taiwanica, 8(1): 55-64.

Hsu, M. J. and Y. S. Lin, 1997. Breeding ecology of Styan bulbul Pycnonotus taivanus in Taiwan. IBIS 139(3): 518-522. (SCI)

Jiang, L., W. L. Wu and Y. S. Lin, 1997. Efficient methods for isolating mitochondrial DNA from fresh or fixed mulluscan specimens. Zoological Studies, 36(1): 74-78. (SCI)

Tsao, E.H., Y.S. Lin, R.J. Behnke and E.P. Bergersen, 1998. Microhabitat use by Formosan landlocked salmon, Oncorhynchus masou formosanus. Zoological Studies, 37(4): 269-281. (SCI)

Kam, Y.C., C.F. Lin, and Y.S. Lin, 1998. Density effects of oophagous tadpoles of Chirxalus eiffingerl (Anura: Rhacophoridae): importance of material brood care. Herpetologia.54(4):425-433. (SCI)

Chu, J. H., H. Y. Wu, Y. J. Yang, O. Takenaka and Y. S. Lin. 1998. Polymorphic microsatellite loci and low invasive DNA sampling in Macaca cyclopis. Primates.40(4):573-580. (SCI)

Yu, H.T. and Y.S. Lin. 1999 . Age, reproduction and demopraphy of the spiny rat(Muridae: Niviviter coxingi) in subtropical cntral Taiwan. Zoological studies: 38(2):153-163. (SCI)

Chang, M.H, Y.S.Lin and L.C.Chaung. 1999 Effect of dams on fish assemblages of the Tachia river, Taiwan. Acta zoologicata taiwanica 10(2):77-90

Hsu,F.H, F,J.Lin abd ,Y. S. Lin.2000 Hylogeographic Variation in Mitochondrial DNA of Formosan white-bellied Rat Niviventer culturatus. Zoological studies.39(1)33-46. (SCI)

Chu, J.H., Y.S.Lin and H.Y.Wu .2001. Mutochondrial DNA diversity in the Taiwanese macaque (macaca cyclopis) . Molecular Ecology (SCI)

Chu, J.H., H.Y.Wu and Y.S.Lin .2001. Kinship and dominance vs social behavior of female  Macaca cyclopsis in Chai-shan under environmental stress. Presented at International Primate  Symposium.2001

Chen,Y.H, Y.J.Su, Y.S.Lin and Y.C.Kam. 2001.inter-and intraclutch competition among oophagous tadpoles of the taiwanese tree frog, chirixalus eiffingeri (anura: rhacophoridae). Herpetological:57(4):438-448. (SCI)

Ghen,T.-C. , Y.-C. Kam, and Y.-S. Lin 2001.Thermal physiology and reproductive phenology of Buergeria japonica (Rhacophoridae) breeding in a stream and a geothermal hotspring in Taiwan. Zoological Science 18:591-596. (SCI)

Kam, Y.C., Y.J. Su, J. L. Lu and Y. S. Lin 2001 Intraspecific interactions among oophagous tadpoles( Chirixalus eiffingeri: Rhacophoridae) living in bamboo stumps in Taiwan. J.Zool. Lond. (SCI)

Hsu, F.H., F.J. Lin and Y.S. Lin 2001 Phylogeographic Structure of the Formosan Wood Mouse, Apodemus semotus Thomas. Zoological studies. 40(2): 91-102. (SCI)

Lai, S.J., Y.C. Kam and Y.S. Lin 2003 Elevational Variation in Reproductive and Life History Traits of Sauter's Frog Rana sauteri Boulenger, 1909 in Taiwan. Zoological Studies 42(1): 193-202. (SCI)

Hsieh, Y.L., Y.S. Lin and I.M. Tso 2003 Ground spider diversity in the Kenting uplifted coral reef forest, Taiwan: a comparison between habitats receiving various disturbances. Biodiversity and Conservation 12: 2173-2194. (SCI)

Hsu. Y., L. L.Severinghaus, Y.-S Lin. 2003 Isolation and characterization of microsatellite DNA markers from the Lanyu scops owl (Otus elegans botelensis). Molecular Ecology Notes.3: 595-597. (SCI)

Huang, K.Y., Y.S.Lin and L.L.Servinghaus. 2004.The diet ofbersa sparrow hawk (Accipiter virgatus) in Yamingshan area, Northern Taiwan. Taiwania :49(3):1-10.